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Top-ranked similarities (based on backbone shifts), as measured by a combination of score and contiguity.
Some relevant parameters:  
        HELIX min length: 5     STRAND min length: 3
        shift-tolerance = -10    permissible-violations = 4   max-breaks = NIL   retain-m = 100   best-n = 100
        anglethresh = 0.5    septhresh = 5   min_length = 4   rmsd-tol = 9.9999999999999E12

Legend:
( ix1 chain1 )  ( ix2 chain2 )   rho___12 rho___21 L2_ERROR (Xbad Xsig Xtot) BRK   maxrho12 maxrho21  SS1 SS2

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( 4719 1omz_A)  ( 1043 1e5k_A)     0.5999   0.9223   3.4665 (   1   46   66)   0     0.5999   0.9223   20  13
( 4719 1omz_A)  ( 1325 1ezi_A)     0.6220   0.7070   4.9429 (   6   59   78)   0     0.6220   0.7070   20  17
( 4719 1omz_A)  ( 1590 1fo8_A)     0.6384   0.5751   3.9589 (   7   60   91)   0     0.6384   0.5751   20  23
( 4719 1omz_A)  ( 1690 1g1l_A)     0.7372   0.6738   4.1427 (   5   73  105)   0     0.7372   0.6738   20  22
( 4719 1omz_A)  ( 1776 1g97_A)     0.6765   0.7070   4.1377 (   6   68   91)   0     0.6765   0.7070   20  19
( 4719 1omz_A)  ( 1787 1ga8_A)     0.6575   0.5815   3.1225 (   9   74  105)   0     0.7508   0.6621   20  24
( 4719 1omz_A)  ( 2122 1h7e_A)     0.7301   0.6985   4.9984 (   6   78  105)   0     0.7301   0.6985   20  21
( 4719 1omz_A)  ( 2402 1i52_A)     0.5038   0.5350   4.7270 (  11   62   78)   0     0.5038   0.6056   20  16
( 4719 1omz_A)  ( 3068 1jv1_A)     0.3000   0.1818   6.4477 (   0   11   15)   0     0.7959   0.4845   20  33
( 4719 1omz_A)  ( 3093 1jyk_A)     0.5684   0.6024   3.6266 (   9   59   91)   0     0.5684   0.6024   20  17
( 4719 1omz_A)  ( 3466 1kws_A)     0.5000   0.5882   3.6858 (   0   29   45)   0     0.5000   0.5882   20  17
( 4719 1omz_A)  ( 3651 1ll2_A)     0.5937   0.6089   3.4138 (   8   57   91)   0     0.5937   0.6089   20  19
( 4719 1omz_A)  ( 4544 1o7q_A)     0.6452   0.7982   3.8952 (   3   47   78)   0     0.6873   0.8384   20  16
( 4719 1omz_A)  ( 4719 1omz_A)     1.0000   1.0000   0.0000 (   0  153  190)   0     1.0000   1.0000   20  20
( 4719 1omz_A)  ( 5159 1pzt_A)     0.3000   0.4000   3.5719 (   0    5   15)   0     0.6466   0.8525   20  15
( 4719 1omz_A)  ( 5322 1qg8_A)     0.7989   0.8871   4.8214 (   2   75  120)   0     0.7989   0.8871   20  18
( 4719 1omz_A)  ( 5476 1qwj_A)     0.5999   0.8565   3.9468 (   1   46   66)   0     0.5999   0.8565   20  14
( 4719 1omz_A)  ( 5768 1s4n_A)     0.3000   0.2400   3.5420 (   0    8   15)   0     0.5675   0.5329   20  25
( 4719 1omz_A)  ( 6228 1vh3_A)     0.6751   0.7053   4.5742 (   6   67   91)   0     0.6751   0.7053   20  19

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