------------------------------------------------------------------------------------------------------------------------- Top-ranked similarities (based on backbone shifts), as measured by a combination of score and contiguity. Some relevant parameters: HELIX min length: 5 STRAND min length: 3 shift-tolerance = -10 permissible-violations = 4 max-breaks = NIL retain-m = 100 best-n = 100 anglethresh = 0.5 septhresh = 5 min_length = 4 rmsd-tol = 9.9999999999999E12 Legend: ( ix1 chain1 ) ( ix2 chain2 ) rho___12 rho___21 L2_ERROR (Xbad Xsig Xtot) BRK maxrho12 maxrho21 SS1 SS2 ------------------------------------------------------------------------------------------------------------------------- ( 4719 1omz_A) ( 1043 1e5k_A) 0.5999 0.9223 3.4665 ( 1 46 66) 0 0.5999 0.9223 20 13 ( 4719 1omz_A) ( 1325 1ezi_A) 0.6220 0.7070 4.9429 ( 6 59 78) 0 0.6220 0.7070 20 17 ( 4719 1omz_A) ( 1590 1fo8_A) 0.6384 0.5751 3.9589 ( 7 60 91) 0 0.6384 0.5751 20 23 ( 4719 1omz_A) ( 1690 1g1l_A) 0.7372 0.6738 4.1427 ( 5 73 105) 0 0.7372 0.6738 20 22 ( 4719 1omz_A) ( 1776 1g97_A) 0.6765 0.7070 4.1377 ( 6 68 91) 0 0.6765 0.7070 20 19 ( 4719 1omz_A) ( 1787 1ga8_A) 0.6575 0.5815 3.1225 ( 9 74 105) 0 0.7508 0.6621 20 24 ( 4719 1omz_A) ( 2122 1h7e_A) 0.7301 0.6985 4.9984 ( 6 78 105) 0 0.7301 0.6985 20 21 ( 4719 1omz_A) ( 2402 1i52_A) 0.5038 0.5350 4.7270 ( 11 62 78) 0 0.5038 0.6056 20 16 ( 4719 1omz_A) ( 3068 1jv1_A) 0.3000 0.1818 6.4477 ( 0 11 15) 0 0.7959 0.4845 20 33 ( 4719 1omz_A) ( 3093 1jyk_A) 0.5684 0.6024 3.6266 ( 9 59 91) 0 0.5684 0.6024 20 17 ( 4719 1omz_A) ( 3466 1kws_A) 0.5000 0.5882 3.6858 ( 0 29 45) 0 0.5000 0.5882 20 17 ( 4719 1omz_A) ( 3651 1ll2_A) 0.5937 0.6089 3.4138 ( 8 57 91) 0 0.5937 0.6089 20 19 ( 4719 1omz_A) ( 4544 1o7q_A) 0.6452 0.7982 3.8952 ( 3 47 78) 0 0.6873 0.8384 20 16 ( 4719 1omz_A) ( 4719 1omz_A) 1.0000 1.0000 0.0000 ( 0 153 190) 0 1.0000 1.0000 20 20 ( 4719 1omz_A) ( 5159 1pzt_A) 0.3000 0.4000 3.5719 ( 0 5 15) 0 0.6466 0.8525 20 15 ( 4719 1omz_A) ( 5322 1qg8_A) 0.7989 0.8871 4.8214 ( 2 75 120) 0 0.7989 0.8871 20 18 ( 4719 1omz_A) ( 5476 1qwj_A) 0.5999 0.8565 3.9468 ( 1 46 66) 0 0.5999 0.8565 20 14 ( 4719 1omz_A) ( 5768 1s4n_A) 0.3000 0.2400 3.5420 ( 0 8 15) 0 0.5675 0.5329 20 25 ( 4719 1omz_A) ( 6228 1vh3_A) 0.6751 0.7053 4.5742 ( 6 67 91) 0 0.6751 0.7053 20 19 -------------------------------------------------------------------------------------------------------------------------