------------------------------------------------------------------------------------------------------------------------- Top-ranked similarities (based on backbone shifts), as measured by a combination of score and contiguity. Some relevant parameters: HELIX min length: 5 STRAND min length: 3 shift-tolerance = -10 permissible-violations = 4 max-breaks = NIL retain-m = 100 best-n = 100 anglethresh = 0.5 septhresh = 5 min_length = 4 rmsd-tol = 9.9999999999999E12 Legend: ( ix1 chain1 ) ( ix2 chain2 ) rho___12 rho___21 L2_ERROR (Xbad Xsig Xtot) BRK maxrho12 maxrho21 SS1 SS2 ------------------------------------------------------------------------------------------------------------------------- ( 5912 1tht_A) ( 76 1a8q ) 0.7139 0.8325 3.1712 ( 2 69 105) 0 0.7140 0.8328 21 18 ( 5912 1tht_A) ( 98 1ac5 ) 0.7557 0.5505 4.7930 ( 4 73 120) 0 0.7852 0.5811 21 29 ( 5912 1tht_A) ( 211 1auo_A) 0.5714 0.7058 3.1028 ( 0 37 66) 0 0.6570 0.7971 21 17 ( 5912 1tht_A) ( 303 1b6g ) 0.7668 0.7668 4.5154 ( 7 81 136) 0 0.8034 0.8034 21 21 ( 5912 1tht_A) ( 453 1brt ) 0.7500 0.8228 4.4547 ( 5 76 120) 0 0.7500 0.8228 21 19 ( 5912 1tht_A) ( 465 1bu8_A) 0.3809 0.4000 3.5052 ( 0 17 28) 0 0.6184 0.6492 21 20 ( 5912 1tht_A) ( 530 1c4x_A) 0.7137 0.8322 4.1985 ( 2 69 105) 0 0.8000 0.9244 21 18 ( 5912 1tht_A) ( 575 1cex ) 0.4286 0.6922 3.6619 ( 0 13 36) 0 0.5212 0.8194 21 13 ( 5912 1tht_A) ( 652 1cpy ) 0.7121 0.5991 4.3111 ( 3 66 105) 0 0.7961 0.6743 21 25 ( 5912 1tht_A) ( 691 1cvl ) 0.5695 0.5976 4.6664 ( 2 34 66) 0 0.5695 0.5976 21 20 ( 5912 1tht_A) ( 849 1din ) 0.6189 0.8659 3.2307 ( 1 38 78) 0 0.6656 0.9276 21 15 ( 5912 1tht_A) ( 925 1dqz_A) 0.7586 0.8368 4.4477 ( 3 65 120) 0 0.7586 0.8368 21 19 ( 5912 1tht_A) ( 960 1dx4_A) 0.3333 0.2121 4.9879 ( 0 11 21) 0 0.8512 0.5448 21 33 ( 5912 1tht_A) ( 1082 1ea5_A) 0.4627 0.3875 4.6663 ( 14 68 105) 0 0.8049 0.4996 21 34 ( 5912 1tht_A) ( 1165 1ehy_A) 0.7115 0.7850 3.0206 ( 3 61 105) 0 0.7115 0.7850 21 19 ( 5912 1tht_A) ( 1173 1ei9_A) 0.5700 0.5700 5.0045 ( 2 37 66) 0 0.6111 0.6111 21 21 ( 5912 1tht_A) ( 1513 1fj2_A) 0.5714 0.7057 3.8901 ( 0 36 66) 0 0.6562 0.7950 21 17 ( 5912 1tht_A) ( 1740 1g66_A) 0.4286 0.7499 3.0326 ( 0 14 36) 0 0.4761 0.8317 21 12 ( 5912 1tht_A) ( 1846 1gkl_A) 0.6665 0.8745 3.6269 ( 1 53 91) 0 0.6665 0.8745 21 16 ( 5912 1tht_A) ( 2535 1imj_A) 0.7141 0.7891 4.0434 ( 1 61 105) 0 0.7611 0.8407 21 19 ( 5912 1tht_A) ( 2595 1isp_A) 0.4762 0.9090 2.5071 ( 0 23 45) 0 0.5236 0.9941 21 11 ( 5912 1tht_A) ( 2616 1iup_A) 0.7142 0.7499 2.3812 ( 1 61 105) 0 0.7372 0.7690 21 20 ( 5912 1tht_A) ( 2632 1ivy_A) 0.7136 0.4999 4.0947 ( 2 61 105) 0 0.7384 0.5291 21 30 ( 5912 1tht_A) ( 2697 1j1i_A) 0.7570 0.8784 3.1426 ( 4 76 120) 0 0.7570 0.8784 21 18 ( 5912 1tht_A) ( 2855 1jfr_A) 0.6190 0.7645 3.7732 ( 0 46 78) 0 0.6562 0.7949 21 17 ( 5912 1tht_A) ( 2934 1jjf_A) 0.6665 0.9323 4.4612 ( 0 54 91) 0 0.6665 0.9323 21 15 ( 5912 1tht_A) ( 2946 1jkm_A) 0.7118 0.7468 4.4118 ( 3 64 105) 0 0.7137 0.7492 21 20 ( 5912 1tht_A) ( 2975 1jmk_C) 0.5703 0.9106 5.5852 ( 2 40 66) 0 0.5703 0.9106 21 13 ( 5912 1tht_A) ( 3062 1ju3_A) 0.5675 0.4783 4.3041 ( 3 42 66) 0 0.7891 0.6863 21 25 ( 5912 1tht_A) ( 3218 1k8q_A) 0.6385 0.5639 5.7326 ( 8 66 105) 0 0.6938 0.5911 21 25 ( 5912 1tht_A) ( 3433 1ku0_A) 0.2381 0.2000 3.3661 ( 0 3 10) 0 0.5830 0.5038 21 25 ( 5912 1tht_A) ( 3558 1l7a_A) 0.7449 0.7786 4.0916 ( 5 69 120) 0 0.7449 0.7786 21 20 ( 5912 1tht_A) ( 3657 1llf_A) 0.4293 0.3668 4.1926 ( 12 54 91) 0 0.7613 0.4848 21 33 ( 5912 1tht_A) ( 3679 1lns_A) 0.7612 0.7612 4.3861 ( 2 76 120) 0 0.7612 0.7612 21 21 ( 5912 1tht_A) ( 3769 1lzl_A) 0.6570 0.7575 3.7392 ( 4 54 91) 0 0.7138 0.8324 21 18 ( 5912 1tht_A) ( 3814 1m33_A) 0.6372 0.7490 3.5688 ( 5 50 91) 0 0.6372 0.7522 21 17 ( 5912 1tht_A) ( 3943 1mj5_A) 0.7001 0.7242 3.6210 ( 7 67 120) 0 0.7539 0.7899 21 20 ( 5912 1tht_A) ( 3984 1mna_A) 0.6183 0.7626 4.3475 ( 2 49 78) 0 0.6183 0.7626 21 17 ( 5912 1tht_A) ( 4033 1mtz_A) 0.7614 0.8413 3.7003 ( 2 76 120) 0 0.7614 0.8413 21 19 ( 5912 1tht_A) ( 4065 1mx1_A) 0.4571 0.3917 4.4795 ( 14 67 105) 0 0.7601 0.4847 21 33 ( 5912 1tht_A) ( 4422 1nx9_A) 0.6658 0.5596 3.6522 ( 2 51 91) 0 0.6658 0.5596 21 25 ( 5912 1tht_A) ( 4769 1orv_A) 0.6666 0.8235 2.4266 ( 0 53 91) 0 0.7490 0.9059 21 17 ( 5912 1tht_A) ( 5028 1pja_A) 0.5712 0.6662 3.7162 ( 1 31 66) 0 0.5713 0.6664 21 18 ( 5912 1tht_A) ( 5168 1q0r_A) 0.7143 0.8333 2.5167 ( 0 64 105) 0 0.7618 0.8886 21 18 ( 5912 1tht_A) ( 5301 1qe3_A) 0.3333 0.2258 2.6210 ( 0 12 21) 0 0.7953 0.5463 21 31 ( 5912 1tht_A) ( 5315 1qfm_A) 0.7112 0.8736 4.1573 ( 3 60 105) 0 0.7595 0.9345 21 17 ( 5912 1tht_A) ( 5352 1qj4_A) 0.5713 0.6665 4.5141 ( 0 28 66) 0 0.6162 0.7161 21 18 ( 5912 1tht_A) ( 5380 1qlw_A) 0.6659 0.6357 4.0627 ( 2 53 91) 0 0.6659 0.6357 21 22 ( 5912 1tht_A) ( 5400 1qo7_A) 0.6662 0.6360 3.3651 ( 2 59 91) 0 0.6662 0.6360 21 22 ( 5912 1tht_A) ( 5450 1qtr_A) 0.7600 0.7600 4.1702 ( 3 75 120) 0 0.7600 0.7600 21 21 ( 5912 1tht_A) ( 5498 1qz3_A) 0.7137 0.7884 4.1426 ( 2 65 105) 0 0.7137 0.7884 21 19 ( 5912 1tht_A) ( 5522 1r1d_A) 0.6662 0.8731 5.4612 ( 1 50 91) 0 0.7106 0.9236 21 16 ( 5912 1tht_A) ( 5894 1tca ) 0.6158 0.5884 3.4596 ( 3 49 78) 0 0.6158 0.5884 21 22 ( 5912 1tht_A) ( 5912 1tht_A) 1.0000 1.0000 0.0000 ( 0 152 210) 0 1.0000 1.0000 21 21 ( 5912 1tht_A) ( 5913 1tib ) 0.2381 0.2941 6.3667 ( 0 2 10) 0 0.3344 0.4117 21 17 ( 5912 1tht_A) ( 6006 1ufo_A) 0.7464 0.9448 4.9395 ( 5 71 120) 0 0.7464 0.9448 21 16 ( 5912 1tht_A) ( 6129 1uwc_A) 0.2381 0.2778 6.8039 ( 0 6 10) 0 0.4377 0.4835 21 18 ( 5912 1tht_A) ( 6279 1vj5_A) 0.6648 0.6976 3.3394 ( 3 62 91) 0 0.6665 0.6998 21 20 ( 5912 1tht_A) ( 6404 2bce ) 0.3806 0.2285 2.6523 ( 1 15 28) 0 0.7601 0.4570 21 35 ( 5912 1tht_A) ( 6599 3tgl ) 0.2381 0.2632 3.6371 ( 0 5 10) 0 0.5233 0.5781 21 19 -------------------------------------------------------------------------------------------------------------------------