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Top-ranked similarities (based on backbone shifts), as measured by a combination of score and contiguity.
Some relevant parameters:  
        HELIX min length: 5     STRAND min length: 3
        shift-tolerance = -10    permissible-violations = 4   max-breaks = NIL   retain-m = 100   best-n = 100
        anglethresh = 0.5    septhresh = 5   min_length = 4   rmsd-tol = 9.9999999999999E12

Legend:
( ix1 chain1 )  ( ix2 chain2 )   rho___12 rho___21 L2_ERROR (Xbad Xsig Xtot) BRK   maxrho12 maxrho21  SS1 SS2

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( 2036 1h16_A)  ( 2036 1h16_A)     1.0000   1.0000   0.0000 (   0  821  946)   0     1.0000   1.0000   44  44
( 2036 1h16_A)  ( 2219 1hk8_A)     0.5674   0.7776   4.4589 (  11  240  300)   0     0.5674   0.7776   44  32
( 2036 1h16_A)  ( 3514 1l1l_A)     0.3158   0.3070   7.3190 (  39  134  171)   3     0.3780   0.3695   44  48
( 2036 1h16_A)  ( 5676 1rlr  )     0.4431   0.5507   5.4044 (  19  151  190)   1     0.4431   0.5507   44  34

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