------------------------------------------------------------------------------------------------------------------------- Top-ranked similarities (based on backbone shifts), as measured by a combination of score and contiguity. Some relevant parameters: HELIX min length: 5 STRAND min length: 3 shift-tolerance = -10 permissible-violations = 4 max-breaks = NIL retain-m = 100 best-n = 100 anglethresh = 0.5 septhresh = 5 min_length = 4 rmsd-tol = 9.9999999999999E12 Legend: ( ix1 chain1 ) ( ix2 chain2 ) rho___12 rho___21 L2_ERROR (Xbad Xsig Xtot) BRK maxrho12 maxrho21 SS1 SS2 ------------------------------------------------------------------------------------------------------------------------- ( 944 1duv_G) ( 307 1b74_A) 0.8630 0.9552 3.9355 ( 1 15 28) 0 0.8630 0.9552 9 8 ( 944 1duv_G) ( 308 1b74_A) 0.8630 0.6602 3.8342 ( 1 15 28) 0 0.8630 0.6602 9 12 ( 944 1duv_G) ( 944 1duv_G) 1.0000 1.0000 0.0000 ( 0 23 36) 0 1.0000 1.0000 9 9 ( 944 1duv_G) ( 945 1duv_G) 0.6768 0.5604 4.2339 ( 2 15 28) 0 0.8633 0.6111 9 13 ( 944 1duv_G) ( 2852 1jfl_A) 0.7775 0.7775 3.8933 ( 0 10 21) 0 0.7775 0.7775 9 9 ( 944 1duv_G) ( 2853 1jfl_A) 0.7775 0.7775 4.1242 ( 0 10 21) 0 0.7775 0.7775 9 9 ( 944 1duv_G) ( 3039 1js1_X) 0.9999 0.9000 1.7322 ( 0 23 36) 0 0.9999 0.9000 9 10 ( 944 1duv_G) ( 3040 1js1_X) 0.6451 0.5994 4.5067 ( 2 14 28) 0 0.8884 0.7271 9 11 ( 944 1duv_G) ( 3968 1ml4_A) 0.9849 0.8910 1.5423 ( 1 20 36) 0 0.9849 0.8910 9 10 ( 944 1duv_G) ( 3969 1ml4_A) 0.5555 0.4167 4.2161 ( 0 4 10) 0 0.7355 0.5905 9 12 ( 944 1duv_G) ( 4781 1oth_A) 0.5555 0.3846 3.9936 ( 0 4 10) 0 0.8886 0.6153 9 13 -------------------------------------------------------------------------------------------------------------------------