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Top-ranked similarities (based on backbone shifts), as measured by a combination of score and contiguity.
Some relevant parameters:  
        HELIX min length: 5     STRAND min length: 3
        shift-tolerance = -10    permissible-violations = 4   max-breaks = NIL   retain-m = 100   best-n = 100
        anglethresh = 0.5    septhresh = 5   min_length = 4   rmsd-tol = 9.9999999999999E12

Legend:
( ix1 chain1 )  ( ix2 chain2 )   rho___12 rho___21 L2_ERROR (Xbad Xsig Xtot) BRK   maxrho12 maxrho21  SS1 SS2

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( 1370 1f2d_A)  ( 1046 1e5x_A)     0.7677   0.6160   4.2297 (  12  130  171)   0     0.7677   0.6359   23  30
( 1370 1f2d_A)  ( 1370 1f2d_A)     1.0000   1.0000   0.0000 (   0  205  253)   0     1.0000   1.0000   23  23
( 1370 1f2d_A)  ( 2684 1j0a_A)     0.8335   0.8335   2.8177 (  11  146  190)   0     0.8335   0.8335   23  23
( 1370 1f2d_A)  ( 3340 1kl7_A)     0.6648   0.5245   4.9918 (   9   94  120)   0     0.6648   0.5376   23  30
( 1370 1f2d_A)  ( 4495 1o58_A)     0.5899   0.6395   3.9166 (  13   92  120)   0     0.6313   0.7395   23  19
( 1370 1f2d_A)  ( 5138 1pwh_A)     0.7615   0.7615   4.0437 (  12  126  171)   0     0.7615   0.7615   23  23
( 1370 1f2d_A)  ( 5404 1qop_B)     0.8105   0.6726   3.4705 (   8  125  171)   0     0.8105   0.6726   23  28
( 1370 1f2d_A)  ( 5895 1tdj  )     0.7155   0.7375   3.9147 (  12  116  153)   0     0.7155   0.7375   23  22
( 1370 1f2d_A)  ( 6189 1v7c_A)     0.5261   0.5261   3.8345 (  18  102  136)   0     0.5864   0.5864   23  23

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