------------------------------------------------------------------------------------------------------------------------- Top-ranked similarities (based on backbone shifts), as measured by a combination of score and contiguity. Some relevant parameters: HELIX min length: 5 STRAND min length: 3 shift-tolerance = -10 permissible-violations = 4 max-breaks = NIL retain-m = 100 best-n = 100 anglethresh = 0.5 septhresh = 5 min_length = 4 rmsd-tol = 9.9999999999999E12 Legend: ( ix1 chain1 ) ( ix2 chain2 ) rho___12 rho___21 L2_ERROR (Xbad Xsig Xtot) BRK maxrho12 maxrho21 SS1 SS2 ------------------------------------------------------------------------------------------------------------------------- ( 4495 1o58_A) ( 1046 1e5x_A) 0.8531 0.5620 3.8675 ( 8 106 136) 0 0.9331 0.5985 19 30 ( 4495 1o58_A) ( 1370 1f2d_A) 0.6395 0.5899 3.9166 ( 13 92 120) 0 0.7395 0.6313 19 23 ( 4495 1o58_A) ( 2684 1j0a_A) 0.4736 0.3913 2.6020 ( 1 28 36) 0 0.8652 0.7273 19 23 ( 4495 1o58_A) ( 3340 1kl7_A) 0.6811 0.5080 3.9118 ( 12 94 120) 0 0.6811 0.5090 19 30 ( 4495 1o58_A) ( 4495 1o58_A) 1.0000 1.0000 0.0000 ( 0 140 171) 0 1.0000 1.0000 19 19 ( 4495 1o58_A) ( 5138 1pwh_A) 0.8533 0.7222 3.0098 ( 8 106 136) 0 0.8787 0.7328 19 23 ( 4495 1o58_A) ( 5404 1qop_B) 0.9167 0.6382 2.9743 ( 8 124 153) 0 0.9167 0.6588 19 28 ( 4495 1o58_A) ( 5895 1tdj ) 0.7785 0.7086 3.3348 ( 11 106 136) 0 0.8300 0.7391 19 22 ( 4495 1o58_A) ( 6189 1v7c_A) 0.8701 0.7293 3.0718 ( 7 107 136) 0 0.8701 0.7293 19 23 -------------------------------------------------------------------------------------------------------------------------