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Top-ranked similarities (based on backbone shifts), as measured by a combination of score and contiguity.
Some relevant parameters:  
        HELIX min length: 5     STRAND min length: 3
        shift-tolerance = -10    permissible-violations = 4   max-breaks = NIL   retain-m = 100   best-n = 100
        anglethresh = 0.5    septhresh = 5   min_length = 4   rmsd-tol = 9.9999999999999E12

Legend:
( ix1 chain1 )  ( ix2 chain2 )   rho___12 rho___21 L2_ERROR (Xbad Xsig Xtot) BRK   maxrho12 maxrho21  SS1 SS2

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( 1229 1eov_A)  (    1 12as_A)     0.7565   0.8333   3.1015 (   5   93  120)   0     0.7565   0.8333   21  19
( 1229 1eov_A)  (  202 1ati_A)     0.6077   0.5152   4.3474 (   5   59   78)   0     0.6077   0.5152   21  25
( 1229 1eov_A)  (  316 1b8a_A)     0.8965   0.9865   1.7969 (   7  144  171)   0     0.8965   0.9865   21  19
( 1229 1eov_A)  (  397 1bia  )     0.2381   0.4165   7.7987 (   0    6   10)   0     0.4285   0.7491   21  12
( 1229 1eov_A)  ( 1003 1e1o_A)     0.8365   0.7693   4.2419 (   8  122  153)   0     0.8365   0.7693   21  23
( 1229 1eov_A)  ( 1229 1eov_A)     1.0000   1.0000   0.0000 (   0  181  210)   0     1.0000   1.0000   21  21
( 1229 1eov_A)  ( 1733 1g5h_A)     0.5650   0.5919   6.2365 (   4   50   66)   0     0.5650   0.5919   21  20
( 1229 1eov_A)  ( 2081 1h4v_B)     0.3333   0.3500   2.8721 (   0   13   21)   0     0.6488   0.6776   21  20
( 1229 1eov_A)  ( 2166 1hc7_A)     0.6175   0.6480   3.2592 (   3   59   78)   0     0.6175   0.6480   21  20
( 1229 1eov_A)  ( 2741 1j5w_A)     0.2381   0.3125   7.0802 (   0    7   10)   0     0.5164   0.6605   21  16
( 1229 1eov_A)  ( 2925 1jjc_A)     0.4761   0.5879   3.3010 (   1   28   45)   0     0.4977   0.5879   21  17
( 1229 1eov_A)  ( 2930 1jjc_B)     0.4286   0.7500   2.6590 (   0   20   36)   0     0.4470   0.7500   21  12
( 1229 1eov_A)  ( 3510 1l0w_A)     0.7768   0.7464   1.9892 (   9  112  136)   0     0.7768   0.7464   21  22
( 1229 1eov_A)  ( 4322 1nnh_A)     0.8005   0.8800   2.5893 (   6  105  136)   0     0.8005   0.8800   21  19
( 1229 1eov_A)  ( 5306 1qf6_A)     0.6139   0.6759   3.8597 (   4   58   78)   0     0.6620   0.7292   21  19
( 1229 1eov_A)  ( 5646 1riq_A)     0.4642   0.6408   5.6450 (   3   25   45)   0     0.5221   0.7730   21  14
( 1229 1eov_A)  ( 5802 1set_A)     0.2857   0.2608   8.7831 (   0   10   15)   0     0.5878   0.5447   21  23

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