-------------------------------------------------------------------------------------------------------------------------

Top-ranked similarities (based on backbone shifts), as measured by a combination of score and contiguity.
Some relevant parameters:  
        HELIX min length: 5     STRAND min length: 3
        shift-tolerance = -10    permissible-violations = 4   max-breaks = NIL   retain-m = 100   best-n = 100
        anglethresh = 0.5    septhresh = 5   min_length = 4   rmsd-tol = 9.9999999999999E12

Legend:
( ix1 chain1 )  ( ix2 chain2 )   rho___12 rho___21 L2_ERROR (Xbad Xsig Xtot) BRK   maxrho12 maxrho21  SS1 SS2

-------------------------------------------------------------------------------------------------------------------------
(    1 12as_A)  (    1 12as_A)     1.0000   1.0000   0.0000 (   0  144  171)   0     1.0000   1.0000   19  19
(    1 12as_A)  (  202 1ati_A)     0.6836   0.5198   3.3467 (   2   57   78)   0     0.6836   0.5198   19  25
(    1 12as_A)  (  316 1b8a_A)     0.8145   0.8145   2.8673 (   7   96  120)   0     0.8145   0.8145   19  19
(    1 12as_A)  (  397 1bia  )     0.3590   0.4157   7.6945 (   3   13   28)   0     0.5782   0.9089   19  12
(    1 12as_A)  ( 1003 1e1o_A)     0.7820   0.6702   3.7594 (   8   88  120)   0     0.7820   0.6702   19  23
(    1 12as_A)  ( 1229 1eov_A)     0.8333   0.7565   3.1015 (   5   93  120)   0     0.8333   0.7565   19  21
(    1 12as_A)  ( 1733 1g5h_A)     0.5788   0.5499   3.9184 (   1   39   55)   0     0.5788   0.5499   19  20
(    1 12as_A)  ( 2081 1h4v_B)     0.6831   0.6491   5.9979 (   2   62   78)   0     0.7344   0.6981   19  20
(    1 12as_A)  ( 2166 1hc7_A)     0.6257   0.5954   3.5820 (   3   43   66)   0     0.6257   0.5954   19  20
(    1 12as_A)  ( 2741 1j5w_A)     0.5304   0.5908   5.2210 (   5   36   55)   0     0.5304   0.5908   19  16
(    1 12as_A)  ( 2925 1jjc_A)     0.6394   0.6927   3.6502 (   6   55   78)   0     0.6394   0.7057   19  17
(    1 12as_A)  ( 2930 1jjc_B)     0.4737   0.7499   3.5327 (   0   22   36)   0     0.4737   0.7499   19  12
(    1 12as_A)  ( 3510 1l0w_A)     0.6995   0.6330   2.6819 (   9   80  105)   0     0.6995   0.6330   19  22
(    1 12as_A)  ( 4322 1nnh_A)     0.8654   0.8654   2.6081 (   7  102  136)   0     0.8654   0.8654   19  19
(    1 12as_A)  ( 5306 1qf6_A)     0.6315   0.6315   2.9894 (   1   44   66)   0     0.6841   0.6841   19  19
(    1 12as_A)  ( 5646 1riq_A)     0.5260   0.7130   5.5349 (   1   29   45)   0     0.5764   0.7742   19  14
(    1 12as_A)  ( 5802 1set_A)     0.4209   0.3478   4.0933 (   1   21   28)   0     0.4384   0.4239   19  23

-------------------------------------------------------------------------------------------------------------------------