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Top-ranked similarities (based on backbone shifts), as measured by a combination of score and contiguity.
Some relevant parameters:  
        HELIX min length: 5     STRAND min length: 3
        shift-tolerance = -10    permissible-violations = 4   max-breaks = NIL   retain-m = 100   best-n = 100
        anglethresh = 0.5    septhresh = 5   min_length = 4   rmsd-tol = 9.9999999999999E12

Legend:
( ix1 chain1 )  ( ix2 chain2 )   rho___12 rho___21 L2_ERROR (Xbad Xsig Xtot) BRK   maxrho12 maxrho21  SS1 SS2

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( 4856 1p0z_A)  (  100 1acf  )     0.4999   0.4166   5.8523 (   0    8   10)   0     0.7987   0.6661   10  12
( 4856 1p0z_A)  (  496 1byw_A)     0.3999   0.4997   7.2212 (   0    3    6)   0     0.6040   0.6371   10   8
( 4856 1p0z_A)  ( 1279 1ew0_A)     0.7998   0.7998   3.3630 (   0   20   28)   0     0.7998   0.7998   10  10
( 4856 1p0z_A)  ( 1402 1f5m_A)     0.4997   0.4544   7.0227 (   0    8   10)   0     0.7994   0.7269   10  11
( 4856 1p0z_A)  ( 1985 1gw5_M)     0.5000   0.5555   4.4659 (   0    7   10)   0     0.6998   0.7774   10   9
( 4856 1p0z_A)  ( 1986 1gw5_S)     0.3999   0.3999   7.3443 (   0    5    6)   0     0.7941   0.7941   10  10
( 4856 1p0z_A)  ( 2072 1h3q_A)     0.3999   0.4443   6.5304 (   0    5    6)   0     0.7937   0.8783   10   9
( 4856 1p0z_A)  ( 2139 1h8m_A)     0.3999   0.4997   7.2939 (   0    5    6)   0     0.6968   0.8654   10   8
( 4856 1p0z_A)  ( 2472 1ifq_A)     0.3999   0.4996   7.4368 (   0    5    6)   0     0.6996   0.8737   10   8
( 4856 1p0z_A)  ( 2727 1j3w_A)     0.3999   0.4996   7.8383 (   0    5    6)   0     0.6994   0.8732   10   8
( 4856 1p0z_A)  ( 3527 1l3l_A)     0.7992   0.6663   5.0439 (   0   21   28)   0     0.9946   0.8311   10  12
( 4856 1p0z_A)  ( 3652 1ll8_A)     0.3363   0.3790   6.0227 (   1    4    6)   0     0.3363   0.3790   10   7
( 4856 1p0z_A)  ( 3903 1mc0_A)     0.4997   0.4165   7.2632 (   0    8   10)   0     0.7964   0.6652   10  12
( 4856 1p0z_A)  ( 3904 1mc0_A)     0.4996   0.5549   7.5712 (   0    7   10)   0     0.6990   0.7761   10   9
( 4856 1p0z_A)  ( 3961 1mkm_A)     0.3999   0.3636   6.2557 (   0    4    6)   0     0.7921   0.7223   10  11
( 4856 1p0z_A)  ( 4177 1n9l_A)     0.6919   0.8513   2.7688 (   1   15   21)   0     0.6919   0.8513   10   8
( 4856 1p0z_A)  ( 4366 1nrj_A)     0.3998   0.3998   8.4979 (   0    4    6)   0     0.5993   0.5993   10  10
( 4856 1p0z_A)  ( 4420 1nwz_A)     0.8960   0.8157   4.3183 (   1   26   36)   0     0.8960   0.8157   10  11
( 4856 1p0z_A)  ( 4674 1oj5_A)     0.4999   0.5554   5.5386 (   0    6   10)   0     0.6804   0.7457   10   9
( 4856 1p0z_A)  ( 4676 1ojg_A)     0.7964   0.8829   3.1840 (   1   22   28)   0     0.7964   0.8829   10   9
( 4856 1p0z_A)  ( 4856 1p0z_A)     1.0000   1.0000   0.0000 (   0   39   45)   0     1.0000   1.0000   10  10
( 4856 1p0z_A)  ( 4938 1p97_A)     0.6000   0.8569   3.5049 (   0    9   15)   0     0.6807   0.9045   10   7
( 4856 1p0z_A)  ( 5065 1pne  )     0.5000   0.4545   4.1103 (   0    9   10)   0     0.5000   0.4545   10  11
( 4856 1p0z_A)  ( 6238 1vhm_A)     0.4998   0.4998   6.2945 (   0    7   10)   0     0.7841   0.7841   10  10
( 4856 1p0z_A)  ( 6584 3nul  )     0.4999   0.4999   4.9885 (   0    8   10)   0     0.7895   0.7895   10  10

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