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Top-ranked similarities (based on backbone shifts), as measured by a combination of score and contiguity.
Some relevant parameters:
HELIX min length: 5 STRAND min length: 3
shift-tolerance = -10 permissible-violations = 4 max-breaks = NIL retain-m = 100 best-n = 100
anglethresh = 0.5 septhresh = 5 min_length = 4 rmsd-tol = 9.9999999999999E12
Legend:
( ix1 chain1 ) ( ix2 chain2 ) rho___12 rho___21 L2_ERROR (Xbad Xsig Xtot) BRK maxrho12 maxrho21 SS1 SS2
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( 4717 1omw_A) ( 7 1a06 ) 0.7367 0.7776 2.9848 ( 1 64 91) 0 0.7367 0.7776 19 18
( 4717 1omw_A) ( 608 1cja_A) 0.2963 0.2970 6.7667 ( 16 48 66) 0 0.5974 0.6233 19 18
( 4717 1omw_A) ( 675 1csn ) 0.7363 0.8737 3.9489 ( 2 70 91) 0 0.7363 0.8737 19 16
( 4717 1omw_A) ( 1070 1e7u_A) 0.3154 0.2855 7.8543 ( 1 12 15) 0 0.5257 0.4758 19 21
( 4717 1omw_A) ( 1385 1f3m_C) 0.4210 0.4444 3.8285 ( 0 20 28) 0 0.7888 0.8325 19 18
( 4717 1omw_A) ( 1498 1fgk_A) 0.7364 0.9320 3.4557 ( 2 73 91) 0 0.7364 0.9320 19 15
( 4717 1omw_A) ( 1563 1fmk ) 0.7367 0.8747 3.3776 ( 1 72 91) 0 0.7367 0.8747 19 16
( 4717 1omw_A) ( 2018 1gz8_A) 0.7368 0.7777 2.6264 ( 1 69 91) 0 0.7368 0.7777 19 18
( 4717 1omw_A) ( 2439 1ia9_A) 0.4712 0.4967 5.8394 ( 2 25 36) 0 0.4712 0.4967 19 18
( 4717 1omw_A) ( 2446 1ias_A) 0.7364 0.6996 3.5531 ( 2 71 91) 0 0.7364 0.6996 19 20
( 4717 1omw_A) ( 2756 1j7l_A) 0.3611 0.3611 5.1436 ( 14 52 66) 0 0.4133 0.4133 19 19
( 4717 1omw_A) ( 2947 1jks_A) 0.7368 0.8750 1.8770 ( 0 72 91) 0 0.7368 0.8750 19 16
( 4717 1omw_A) ( 3143 1k2p_A) 0.6841 0.9282 2.9383 ( 1 59 78) 0 0.6841 0.9282 19 14
( 4717 1omw_A) ( 3379 1kob_A) 0.6842 0.6190 1.9033 ( 0 62 78) 0 0.7480 0.6880 19 21
( 4717 1omw_A) ( 3778 1m14_A) 0.7367 0.9330 3.2384 ( 1 68 91) 0 0.7367 0.9330 19 15
( 4717 1omw_A) ( 3808 1m2r_A) 0.7189 0.7189 2.9565 ( 5 65 91) 0 0.7189 0.7189 19 19
( 4717 1omw_A) ( 4001 1mp8_A) 0.7363 0.9317 3.8513 ( 2 72 91) 0 0.7363 0.9317 19 15
( 4717 1omw_A) ( 4008 1mq4_A) 0.7895 0.8823 1.6168 ( 0 88 105) 0 0.7895 0.8823 19 17
( 4717 1omw_A) ( 4200 1nd4_A) 0.5262 0.5880 4.1650 ( 1 31 45) 0 0.5262 0.5880 19 17
( 4717 1omw_A) ( 4408 1nvr_A) 0.6841 0.8122 3.7795 ( 0 62 78) 0 0.6841 0.8122 19 16
( 4717 1omw_A) ( 4411 1nw1_A) 0.2631 0.2272 11.1155 ( 0 6 10) 0 0.3021 0.2991 19 22
( 4717 1omw_A) ( 4428 1nxk_A) 0.7363 0.7770 3.5758 ( 2 67 91) 0 0.7363 0.7770 19 18
( 4717 1omw_A) ( 4511 1o6l_A) 0.8390 0.9359 2.1448 ( 4 97 120) 0 0.8390 0.9359 19 17
( 4717 1omw_A) ( 4519 1o6y_A) 0.7368 0.8748 2.8054 ( 1 73 91) 0 0.7368 0.8748 19 16
( 4717 1omw_A) ( 4717 1omw_A) 1.0000 1.0000 0.0000 ( 0 151 171) 0 1.0000 1.0000 19 19
( 4717 1omw_A) ( 4889 1p4o_A) 0.7363 0.8226 3.6899 ( 2 70 91) 0 0.7363 0.8226 19 17
( 4717 1omw_A) ( 5013 1phk ) 0.7368 0.8749 2.4087 ( 0 72 91) 0 0.7368 0.8749 19 16
( 4717 1omw_A) ( 5201 1q41_A) 0.7366 0.6665 4.0224 ( 1 66 91) 0 0.7366 0.6665 19 21
( 4717 1omw_A) ( 5248 1q8y_A) 0.7367 0.6999 3.8881 ( 0 68 91) 0 0.7367 0.6999 19 20
( 4717 1omw_A) ( 5510 1r0p_A) 0.7347 0.8199 4.3277 ( 3 70 91) 0 0.7347 0.8199 19 17
( 4717 1omw_A) ( 5539 1r3c_A) 0.7872 0.6807 3.1062 ( 3 73 105) 0 0.7872 0.6807 19 22
( 4717 1omw_A) ( 5609 1rdq_E) 0.8419 0.8886 1.9527 ( 2 98 120) 0 0.8419 0.8886 19 18
( 4717 1omw_A) ( 5917 1tki_A) 0.7347 0.6983 2.2147 ( 3 67 91) 0 0.7347 0.6983 19 20
( 4717 1omw_A) ( 6112 1uu3_A) 0.8421 0.8889 1.8987 ( 0 101 120) 0 0.8421 0.8889 19 18
( 4717 1omw_A) ( 6130 1uwh_A) 0.7366 0.8744 4.0267 ( 1 67 91) 0 0.7366 0.8744 19 16
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