------------------------------------------------------------------------------------------------------------------------- Top-ranked similarities (based on backbone shifts), as measured by a combination of score and contiguity. Some relevant parameters: HELIX min length: 5 STRAND min length: 3 shift-tolerance = -10 permissible-violations = 4 max-breaks = NIL retain-m = 100 best-n = 100 anglethresh = 0.5 septhresh = 5 min_length = 4 rmsd-tol = 9.9999999999999E12 Legend: ( ix1 chain1 ) ( ix2 chain2 ) rho___12 rho___21 L2_ERROR (Xbad Xsig Xtot) BRK maxrho12 maxrho21 SS1 SS2 ------------------------------------------------------------------------------------------------------------------------- ( 5917 1tki_A) ( 7 1a06 ) 0.7980 0.8855 3.0481 ( 3 77 120) 0 0.7980 0.8855 20 18 ( 5917 1tki_A) ( 608 1cja_A) 0.4551 0.4755 6.6542 ( 6 32 55) 0 0.5498 0.6108 20 18 ( 5917 1tki_A) ( 675 1csn ) 0.7481 0.9318 3.8625 ( 3 73 105) 0 0.7481 0.9318 20 16 ( 5917 1tki_A) ( 1070 1e7u_A) 0.2500 0.2381 6.4699 ( 0 8 10) 0 0.4237 0.4196 20 21 ( 5917 1tki_A) ( 1385 1f3m_C) 0.7344 0.8075 3.4355 ( 5 69 105) 0 0.7344 0.8075 20 18 ( 5917 1tki_A) ( 1498 1fgk_A) 0.7496 0.9984 2.7777 ( 2 74 105) 0 0.7496 0.9984 20 15 ( 5917 1tki_A) ( 1563 1fmk ) 0.7449 0.9224 3.1664 ( 4 74 105) 0 0.7449 0.9224 20 16 ( 5917 1tki_A) ( 2018 1gz8_A) 0.2735 0.2926 7.1459 ( 3 11 15) 0 0.7745 0.8473 20 18 ( 5917 1tki_A) ( 2439 1ia9_A) 0.4431 0.4886 6.1470 ( 3 27 36) 0 0.4431 0.4886 20 18 ( 5917 1tki_A) ( 2446 1ias_A) 0.4129 0.4129 3.6347 ( 10 44 66) 0 0.8099 0.8099 20 20 ( 5917 1tki_A) ( 2756 1j7l_A) 0.5925 0.6220 5.9367 ( 4 51 66) 0 0.6431 0.6753 20 19 ( 5917 1tki_A) ( 2947 1jks_A) 0.7917 0.9754 2.1646 ( 5 88 120) 0 0.7917 0.9754 20 16 ( 5917 1tki_A) ( 3143 1k2p_A) 0.6995 0.9970 2.5118 ( 2 61 91) 0 0.6995 0.9970 20 14 ( 5917 1tki_A) ( 3379 1kob_A) 0.9476 0.9029 1.9629 ( 4 120 171) 0 0.9476 0.9029 20 21 ( 5917 1tki_A) ( 3778 1m14_A) 0.7496 0.9984 2.5598 ( 2 72 105) 0 0.7496 0.9984 20 15 ( 5917 1tki_A) ( 3808 1m2r_A) 0.7002 0.7272 2.6871 ( 7 70 105) 0 0.7352 0.7705 20 19 ( 5917 1tki_A) ( 4001 1mp8_A) 0.7484 0.9933 3.2859 ( 3 75 105) 0 0.7484 0.9933 20 15 ( 5917 1tki_A) ( 4008 1mq4_A) 0.7447 0.8706 2.3876 ( 4 73 105) 0 0.7447 0.8706 20 17 ( 5917 1tki_A) ( 4200 1nd4_A) 0.5491 0.6450 6.1141 ( 2 42 55) 0 0.5491 0.6450 20 17 ( 5917 1tki_A) ( 4408 1nvr_A) 0.7495 0.9358 3.4589 ( 2 69 105) 0 0.7495 0.9358 20 16 ( 5917 1tki_A) ( 4411 1nw1_A) 0.3000 0.2727 4.7218 ( 0 9 15) 0 0.3851 0.3750 20 22 ( 5917 1tki_A) ( 4428 1nxk_A) 0.7373 0.8123 3.6529 ( 5 73 105) 0 0.7373 0.8123 20 18 ( 5917 1tki_A) ( 4511 1o6l_A) 0.6982 0.8195 2.5712 ( 3 66 91) 0 0.6982 0.8195 20 17 ( 5917 1tki_A) ( 4519 1o6y_A) 0.7485 0.9330 2.5450 ( 3 76 105) 0 0.7485 0.9330 20 16 ( 5917 1tki_A) ( 4717 1omw_A) 0.6983 0.7347 2.2147 ( 3 67 91) 0 0.6983 0.7347 20 19 ( 5917 1tki_A) ( 4889 1p4o_A) 0.7496 0.8814 3.1455 ( 2 73 105) 0 0.7496 0.8814 20 17 ( 5917 1tki_A) ( 5013 1phk ) 0.7676 0.9130 2.2064 ( 7 86 120) 0 0.7676 0.9130 20 16 ( 5917 1tki_A) ( 5201 1q41_A) 0.7359 0.7031 3.9203 ( 5 71 105) 0 0.7359 0.7031 20 21 ( 5917 1tki_A) ( 5248 1q8y_A) 0.7894 0.7894 3.6059 ( 5 83 120) 0 0.7894 0.7894 20 20 ( 5917 1tki_A) ( 5510 1r0p_A) 0.7482 0.8783 3.5062 ( 3 73 105) 0 0.7482 0.8783 20 17 ( 5917 1tki_A) ( 5539 1r3c_A) 0.7360 0.6730 2.6311 ( 5 71 105) 0 0.7360 0.6730 20 22 ( 5917 1tki_A) ( 5609 1rdq_E) 0.7484 0.8306 2.5187 ( 3 74 105) 0 0.7484 0.8306 20 18 ( 5917 1tki_A) ( 5917 1tki_A) 1.0000 1.0000 0.0000 ( 0 145 190) 0 1.0000 1.0000 20 20 ( 5917 1tki_A) ( 6112 1uu3_A) 0.7480 0.8299 2.1697 ( 3 70 105) 0 0.7480 0.8299 20 18 ( 5917 1tki_A) ( 6130 1uwh_A) 0.7439 0.9195 3.8941 ( 4 71 105) 0 0.7439 0.9195 20 16 -------------------------------------------------------------------------------------------------------------------------