------------------------------------------------------------------------------------------------------------------------- Top-ranked similarities (based on backbone shifts), as measured by a combination of score and contiguity. Some relevant parameters: HELIX min length: 5 STRAND min length: 3 shift-tolerance = -10 permissible-violations = 4 max-breaks = NIL retain-m = 100 best-n = 100 anglethresh = 0.5 septhresh = 5 min_length = 4 rmsd-tol = 9.9999999999999E12 Legend: ( ix1 chain1 ) ( ix2 chain2 ) rho___12 rho___21 L2_ERROR (Xbad Xsig Xtot) BRK maxrho12 maxrho21 SS1 SS2 ------------------------------------------------------------------------------------------------------------------------- ( 3729 1ltx_R) ( 282 1b37_A) 0.9989 0.6665 4.1415 ( 0 10 15) 0 0.9989 0.6665 6 9 ( 3729 1ltx_R) ( 503 1c0p_A) 0.9984 0.9984 4.5519 ( 0 9 15) 0 0.9984 0.9984 6 6 ( 3729 1ltx_R) ( 757 1d5t_A) 0.9994 0.9994 3.5644 ( 0 9 15) 0 0.9994 0.9994 6 6 ( 3729 1ltx_R) ( 1202 1el5_A) 0.9993 0.9993 3.6849 ( 0 10 15) 0 0.9993 0.9993 6 6 ( 3729 1ltx_R) ( 1440 1f8r_A) 0.9995 0.6666 3.3072 ( 0 10 15) 0 0.9995 0.6666 6 9 ( 3729 1ltx_R) ( 1897 1gpe_A) 0.9965 0.4285 5.5194 ( 0 8 15) 0 0.9965 0.4285 6 14 ( 3729 1ltx_R) ( 3061 1ju2_A) 0.8331 0.5555 3.6745 ( 0 6 10) 0 0.8331 0.5555 6 9 ( 3729 1ltx_R) ( 3114 1k0i_A) 0.8317 0.6246 5.7611 ( 0 5 10) 0 0.8317 0.6246 6 8 ( 3729 1ltx_R) ( 3271 1kdg_A) 0.1995 0.1956 14.8670 ( 1 2 6) 0 0.1998 0.1982 6 11 ( 3729 1ltx_R) ( 3729 1ltx_R) 1.0000 1.0000 0.0000 ( 0 10 15) 0 1.0000 1.0000 6 6 ( 3729 1ltx_R) ( 4128 1n4w_A) 0.8329 0.7141 4.0537 ( 0 6 10) 0 0.8329 0.7141 6 7 ( 3729 1ltx_R) ( 4238 1ng4_A) 0.9994 0.8569 3.5380 ( 0 9 15) 0 0.9994 0.8569 6 7 ( 3729 1ltx_R) ( 5025 1pj5_A) 0.9992 0.7498 3.7824 ( 0 10 15) 0 0.9992 0.7498 6 8 ( 3729 1ltx_R) ( 5058 1pn0_A) 0.9982 0.7496 4.6705 ( 0 9 15) 0 0.9982 0.7496 6 8 ( 3729 1ltx_R) ( 5761 1s3e_A) 0.9994 0.7499 3.4694 ( 0 8 15) 0 0.9994 0.7499 6 8 ( 3729 1ltx_R) ( 5804 1sez_A) 0.9992 0.7498 3.7980 ( 0 8 15) 0 0.9992 0.7498 6 8 ( 3729 1ltx_R) ( 6215 1ve9_A) 0.9994 0.8568 3.6062 ( 0 9 15) 0 0.9994 0.8568 6 7 -------------------------------------------------------------------------------------------------------------------------