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Top-ranked similarities (based on backbone shifts), as measured by a combination of score and contiguity.
Some relevant parameters:  
        HELIX min length: 5     STRAND min length: 3
        shift-tolerance = -10    permissible-violations = 4   max-breaks = NIL   retain-m = 100   best-n = 100
        anglethresh = 0.5    septhresh = 5   min_length = 4   rmsd-tol = 9.9999999999999E12

Legend:
( ix1 chain1 )  ( ix2 chain2 )   rho___12 rho___21 L2_ERROR (Xbad Xsig Xtot) BRK   maxrho12 maxrho21  SS1 SS2

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( 4521 1o6z_A)  (  320 1b8p_A)     0.8727   0.7386   3.5953 (   2   30   36)   0     0.8727   0.7386   10  12
( 4521 1o6z_A)  ( 1322 1ez4_A)     0.7977   0.7259   3.5780 (   1   25   28)   0     0.7977   0.7259   10  11
( 4521 1o6z_A)  ( 1965 1gv1_A)     0.9987   0.8328   3.0103 (   1   40   45)   0     0.9987   0.8328   10  12
( 4521 1o6z_A)  ( 2329 1hye_A)     0.9987   0.8328   2.7576 (   1   39   45)   0     0.9987   0.8328   10  12
( 4521 1o6z_A)  ( 2331 1hyh_A)     0.6973   0.9847   3.0056 (   1   20   21)   0     0.6973   0.9847   10   7
( 4521 1o6z_A)  ( 3656 1lld_A)     0.6960   0.9773   2.9455 (   1   18   21)   0     0.6960   0.9773   10   7
( 4521 1o6z_A)  ( 4521 1o6z_A)     1.0000   1.0000   0.0000 (   0   41   45)   0     1.0000   1.0000   10  10
( 4521 1o6z_A)  ( 4586 1obb_A)     0.7912   0.4677   6.5393 (   3   30   36)   0     0.7912   0.4677   10  19
( 4521 1o6z_A)  ( 5878 1t2d_A)     0.7977   0.7259   3.5692 (   1   25   28)   0     0.7977   0.7259   10  11
( 4521 1o6z_A)  ( 5943 1u8x_X)     0.8685   0.5593   6.9836 (   2   30   36)   0     0.8685   0.5593   10  16
( 4521 1o6z_A)  ( 6421 2cmd  )     0.8759   0.8759   3.0560 (   2   31   36)   0     0.8759   0.8759   10  10
( 4521 1o6z_A)  ( 6628 6ldh  )     0.6973   0.9846   3.1821 (   1   20   21)   0     0.6973   0.9846   10   7
( 4521 1o6z_A)  ( 6636 7mdh_A)     0.5419   0.5522   4.1445 (   4   23   28)   0     0.5419   0.5562   10   9

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