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Top-ranked similarities (based on backbone shifts), as measured by a combination of score and contiguity.
Some relevant parameters:  
        HELIX min length: 5     STRAND min length: 3
        shift-tolerance = -10    permissible-violations = 4   max-breaks = NIL   retain-m = 100   best-n = 100
        anglethresh = 0.5    septhresh = 5   min_length = 4   rmsd-tol = 9.9999999999999E12

Legend:
( ix1 chain1 )  ( ix2 chain2 )   rho___12 rho___21 L2_ERROR (Xbad Xsig Xtot) BRK   maxrho12 maxrho21  SS1 SS2

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( 4015 1mrj  )  (  762 1d6a_A)     0.8947   0.9911   2.4824 (   5  115  153)   0     0.8947   0.9911   20  18
( 4015 1mrj  )  ( 1821 1ggp_A)     0.7412   0.9649   2.7760 (   5   80  105)   0     0.7412   0.9649   20  15
( 4015 1mrj  )  ( 2305 1hwm_A)     0.8979   0.9964   2.1954 (   4  116  153)   0     0.8979   0.9964   20  18
( 4015 1mrj  )  ( 3658 1lln_A)     0.8090   0.8790   3.1412 (   9  112  136)   0     0.8090   0.8796   20  18
( 4015 1mrj  )  ( 3689 1lp8_A)     0.8474   0.9941   3.4477 (   4  104  136)   0     0.8474   0.9941   20  17
( 4015 1mrj  )  ( 3809 1m2t_A)     0.9986   0.9513   2.5785 (   4  150  190)   0     0.9986   0.9513   20  21
( 4015 1mrj  )  ( 4015 1mrj  )     1.0000   1.0000   0.0000 (   0  160  190)   0     1.0000   1.0000   20  20
( 4015 1mrj  )  ( 5549 1r4p_A)     0.7909   0.6773   2.5172 (  13  129  153)   0     0.8570   0.7049   20  25
( 4015 1mrj  )  ( 6079 1uq5_A)     0.8980   0.9966   1.9751 (   4  117  153)   0     0.8980   0.9966   20  18

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