------------------------------------------------------------------------------------------------------------------------- Top-ranked similarities (based on backbone shifts), as measured by a combination of score and contiguity. Some relevant parameters: HELIX min length: 5 STRAND min length: 3 shift-tolerance = -10 permissible-violations = 4 max-breaks = NIL retain-m = 100 best-n = 100 anglethresh = 0.5 septhresh = 5 min_length = 4 rmsd-tol = 9.9999999999999E12 Legend: ( ix1 chain1 ) ( ix2 chain2 ) rho___12 rho___21 L2_ERROR (Xbad Xsig Xtot) BRK maxrho12 maxrho21 SS1 SS2 ------------------------------------------------------------------------------------------------------------------------- ( 4652 1oh0_A) ( 574 1cew_I) 0.4987 0.5690 10.1768 ( 0 5 6) 0 0.4987 0.5690 8 7 ( 4652 1oh0_A) ( 1121 1eej_A) 0.6247 0.8319 5.5116 ( 0 6 10) 0 0.6247 0.8319 8 6 ( 4652 1oh0_A) ( 1195 1ekm_A) 0.6247 0.8319 5.5583 ( 0 5 10) 0 0.6247 0.8319 8 6 ( 4652 1oh0_A) ( 1196 1ekm_A) 0.7133 0.7133 5.9784 ( 1 11 15) 0 0.7133 0.7133 8 8 ( 4652 1oh0_A) ( 1248 1eqk_A) 0.4995 0.5704 8.2241 ( 0 4 6) 0 0.5000 0.5714 8 7 ( 4652 1oh0_A) ( 2003 1gy7_A) 0.9991 0.7271 3.9222 ( 0 15 28) 0 0.9991 0.7271 8 11 ( 4652 1oh0_A) ( 2228 1hkx_A) 0.9713 0.7902 3.9479 ( 1 17 28) 0 0.9713 0.7902 8 10 ( 4652 1oh0_A) ( 2464 1idp_A) 0.8179 0.6753 4.6379 ( 2 19 28) 0 0.8179 0.6753 8 11 ( 4652 1oh0_A) ( 2563 1iq8_A) 0.7491 0.4999 5.6339 ( 0 12 15) 0 0.7491 0.5390 8 12 ( 4652 1oh0_A) ( 2630 1ivw_A) 0.7492 0.8556 5.4306 ( 0 9 15) 0 0.7492 0.8556 8 7 ( 4652 1oh0_A) ( 2944 1jkg_A) 0.9987 0.7270 4.3112 ( 0 16 28) 0 0.9987 0.7270 8 11 ( 4652 1oh0_A) ( 2945 1jkg_B) 0.9982 0.6152 4.6827 ( 0 17 28) 0 0.9982 0.6152 8 13 ( 4652 1oh0_A) ( 3418 1ksi_A) 0.5144 0.5651 5.7949 ( 1 6 10) 0 0.5144 0.6665 8 6 ( 4652 1oh0_A) ( 3419 1ksi_A) 0.6791 0.7921 5.7255 ( 1 9 15) 0 0.6791 0.7921 8 6 ( 4652 1oh0_A) ( 3888 1m98_A) 0.9980 0.7993 4.7923 ( 0 15 28) 0 0.9980 0.7993 8 10 ( 4652 1oh0_A) ( 3994 1mol_A) 0.4997 0.5708 7.2354 ( 0 2 6) 0 0.4997 0.5708 8 7 ( 4652 1oh0_A) ( 4174 1n9e_A) 0.5525 0.5942 5.7748 ( 1 7 10) 0 0.5525 0.5942 8 7 ( 4652 1oh0_A) ( 4175 1n9e_A) 0.4998 0.4998 6.7452 ( 0 1 6) 0 0.4998 0.4998 8 8 ( 4652 1oh0_A) ( 4328 1nnv_A) 0.6247 0.8319 5.5562 ( 0 5 10) 0 0.6247 0.8319 8 6 ( 4652 1oh0_A) ( 4419 1nww_A) 0.9848 0.7949 2.6190 ( 1 20 28) 0 0.9848 0.7949 8 10 ( 4652 1oh0_A) ( 4543 1o7n_B) 0.9420 0.6581 5.0145 ( 1 14 28) 0 0.9420 0.6581 8 12 ( 4652 1oh0_A) ( 4575 1oac_A) 0.5000 0.6665 4.5126 ( 0 3 6) 0 0.5000 0.6665 8 6 ( 4652 1oh0_A) ( 4576 1oac_A) 0.6792 0.7923 5.4396 ( 1 9 15) 0 0.6792 0.7923 8 6 ( 4652 1oh0_A) ( 4596 1ocv_A) 0.9993 0.7271 3.6513 ( 0 19 28) 0 0.9993 0.7271 8 11 ( 4652 1oh0_A) ( 4621 1of5_B) 0.9988 0.7270 4.2517 ( 0 16 28) 0 0.9988 0.7270 8 11 ( 4652 1oh0_A) ( 4652 1oh0_A) 1.0000 1.0000 0.0000 ( 0 21 28) 0 1.0000 1.0000 8 8 ( 4652 1oh0_A) ( 5199 1q40_A) 0.9610 0.9610 5.9906 ( 1 16 28) 0 0.9610 0.9610 8 8 ( 4652 1oh0_A) ( 5200 1q40_B) 0.9704 0.7899 4.7620 ( 1 17 28) 0 0.9704 0.7899 8 10 ( 4652 1oh0_A) ( 5230 1q7h_A) 0.5525 0.6324 5.3228 ( 1 7 10) 0 0.5525 0.6664 8 6 ( 4652 1oh0_A) ( 5769 1s5a_A) 0.9766 0.7223 4.0403 ( 1 18 28) 0 0.9766 0.7223 8 11 ( 4652 1oh0_A) ( 5821 1sjw_A) 0.6424 0.5886 2.4930 ( 2 14 21) 0 0.6424 0.5886 8 10 ( 4652 1oh0_A) ( 5851 1stf_I) 0.6239 0.8289 7.3509 ( 0 5 10) 0 0.6239 0.8289 8 6 ( 4652 1oh0_A) ( 6014 1ugi_A) 0.4998 0.5711 6.1150 ( 0 2 6) 0 0.4998 0.5711 8 7 ( 4652 1oh0_A) ( 6319 1vqq_A) 0.6076 0.6076 5.3208 ( 1 7 15) 0 0.6076 0.6076 8 8 -------------------------------------------------------------------------------------------------------------------------