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Top-ranked similarities (based on backbone shifts), as measured by a combination of score and contiguity.
Some relevant parameters:  
        HELIX min length: 5     STRAND min length: 3
        shift-tolerance = -10    permissible-violations = 4   max-breaks = NIL   retain-m = 100   best-n = 100
        anglethresh = 0.5    septhresh = 5   min_length = 4   rmsd-tol = 9.9999999999999E12

Legend:
( ix1 chain1 )  ( ix2 chain2 )   rho___12 rho___21 L2_ERROR (Xbad Xsig Xtot) BRK   maxrho12 maxrho21  SS1 SS2

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( 1329 1ezv_B)  ( 1327 1ezv_A)     0.8215   0.7087   3.4179 (   2   34   45)   0     0.8215   0.7087   12  14
( 1329 1ezv_B)  ( 1328 1ezv_A)     0.7358   0.6287   6.0017 (   3   28   45)   0     0.7358   0.6287   12  15
( 1329 1ezv_B)  ( 1329 1ezv_B)     1.0000   1.0000   0.0000 (   0   53   66)   0     1.0000   1.0000   12  12
( 1329 1ezv_B)  ( 1330 1ezv_B)     0.4165   0.5547   8.1012 (   0    5   10)   0     0.4165   0.5547   12   9
( 1329 1ezv_B)  ( 2265 1hr6_A)     0.8714   0.7635   3.2865 (   3   40   55)   0     0.8714   0.7635   12  14
( 1329 1ezv_B)  ( 2266 1hr6_A)     0.7074   0.6454   4.1870 (   4   34   45)   0     0.7074   0.6454   12  14
( 1329 1ezv_B)  ( 2267 1hr6_B)     0.8713   0.7635   3.5151 (   3   40   55)   0     0.8713   0.7635   12  14
( 1329 1ezv_B)  ( 2268 1hr6_B)     0.9053   0.7804   5.0269 (   2   40   55)   0     0.9053   0.7804   12  14
( 1329 1ezv_B)  ( 2750 1j6w_A)     0.5829   0.8720   6.2665 (   0   11   21)   1     0.5829   0.8720   12   8
( 1329 1ezv_B)  ( 2773 1j98_A)     0.1940   0.1987  11.5607 (   2    4    6)   0     0.5828   0.8710   12   8
( 1329 1ezv_B)  ( 3494 1l0l_A)     0.6651   0.5707   4.5475 (   1   22   28)   0     0.6651   0.5707   12  14
( 1329 1ezv_B)  ( 3495 1l0l_B)     0.8626   0.7590   2.9682 (   3   38   55)   0     0.8626   0.7590   12  14
( 1329 1ezv_B)  ( 3496 1l0l_B)     0.7757   0.7757   4.2640 (   3   33   45)   0     0.7757   0.7757   12  12

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