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Top-ranked similarities (based on backbone shifts), as measured by a combination of score and contiguity.
Some relevant parameters:  
        HELIX min length: 5     STRAND min length: 3
        shift-tolerance = -10    permissible-violations = 4   max-breaks = NIL   retain-m = 100   best-n = 100
        anglethresh = 0.5    septhresh = 5   min_length = 4   rmsd-tol = 9.9999999999999E12

Legend:
( ix1 chain1 )  ( ix2 chain2 )   rho___12 rho___21 L2_ERROR (Xbad Xsig Xtot) BRK   maxrho12 maxrho21  SS1 SS2

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(  967 1dxj_A)  (    2 153l  )     0.3802   0.4337   7.2457 (   2    9   10)   0     0.5453   0.8556   11   7
(  967 1dxj_A)  (  155 1am7_A)     0.5454   0.7498   3.8222 (   0   13   15)   0     0.5454   0.7498   11   8
(  967 1dxj_A)  (  329 1b9o_A)   nil
(  967 1dxj_A)  (  591 1chk_A)     0.3985   0.3490   4.2386 (   3   13   15)   0     0.4787   0.3823   11  15
(  967 1dxj_A)  (  967 1dxj_A)     1.0000   1.0000   0.0000 (   0   52   55)   0     1.0000   1.0000   11  11
(  967 1dxj_A)  ( 3137 1k28_A)     0.3523   0.2641   4.8708 (   1    6    6)   0     0.3557   0.3021   11  15
(  967 1dxj_A)  ( 5080 1pqm_A)     0.3636   0.3077   7.2721 (   0    5    6)   0     0.4434   0.3796   11  13
(  967 1dxj_A)  ( 5323 1qgi_A)     0.5453   0.4000   5.7182 (   0    9   15)   0     0.5973   0.5233   11  15
(  967 1dxj_A)  ( 5442 1qsa_A)     0.6362   0.6998   4.2188 (   0   20   21)   0     0.7269   0.7994   11  10
(  967 1dxj_A)  ( 5462 1qus_A)     0.3418   0.2201   7.8242 (   1    5    6)   0     0.5450   0.3333   11  18
(  967 1dxj_A)  ( 6580 3lzt  )     0.3635   0.4994   8.2962 (   0    6    6)   0     0.3636   0.4999   11   8

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