------------------------------------------------------------------------------------------------------------------------- Top-ranked similarities (based on backbone shifts), as measured by a combination of score and contiguity. Some relevant parameters: HELIX min length: 5 STRAND min length: 3 shift-tolerance = -10 permissible-violations = 4 max-breaks = NIL retain-m = 100 best-n = 100 anglethresh = 0.5 septhresh = 5 min_length = 4 rmsd-tol = 9.9999999999999E12 Legend: ( ix1 chain1 ) ( ix2 chain2 ) rho___12 rho___21 L2_ERROR (Xbad Xsig Xtot) BRK maxrho12 maxrho21 SS1 SS2 ------------------------------------------------------------------------------------------------------------------------- ( 1114 1edq_A) ( 417 1bkf ) 0.5288 0.4917 4.8130 ( 1 6 6) 0 0.8331 0.7142 6 7 ( 1114 1edq_A) ( 1114 1edq_A) 1.0000 1.0000 0.0000 ( 0 12 15) 0 1.0000 1.0000 6 6 ( 1114 1edq_A) ( 1243 1eq3_A) 0.6664 0.5713 4.8809 ( 0 3 6) 0 0.6664 0.5713 6 7 ( 1114 1edq_A) ( 1474 1fd9_A) 0.4667 0.3419 5.1255 ( 1 5 6) 0 0.8329 0.4545 6 11 ( 1114 1edq_A) ( 1890 1goi_A) 0.9999 0.8571 1.7447 ( 0 12 15) 0 0.9999 0.8571 6 7 ( 1114 1edq_A) ( 2223 1hkk_A) 0.9999 0.8571 0.8622 ( 0 12 15) 0 0.9999 0.8571 6 7 ( 1114 1edq_A) ( 2604 1itx_A) 0.9999 0.8571 1.1050 ( 0 12 15) 0 0.9999 0.8571 6 7 ( 1114 1edq_A) ( 2642 1ix5_A) 0.2966 0.2798 14.8687 ( 1 3 6) 0 0.2966 0.2798 6 10 ( 1114 1edq_A) ( 2992 1jnd_A) 0.9999 0.9999 1.6727 ( 0 12 15) 0 0.9999 0.9999 6 6 ( 1114 1edq_A) ( 2998 1jnt_A) 0.6664 0.6664 4.9724 ( 0 4 6) 0 0.6664 0.6664 6 6 ( 1114 1edq_A) ( 3075 1jvw_A) 0.4667 0.3419 4.7905 ( 1 5 6) 0 0.8331 0.4545 6 11 ( 1114 1edq_A) ( 3289 1kfw_A) 0.9999 0.9999 1.6511 ( 0 12 15) 0 0.9999 0.9999 6 6 ( 1114 1edq_A) ( 3423 1kt1_A) nil ( 1114 1edq_A) ( 3847 1m5y_A) 0.6666 0.5000 3.8957 ( 0 4 6) 0 0.6666 0.5000 6 8 ( 1114 1edq_A) ( 3848 1m5y_A) 0.1333 0.1332 8.7522 ( 3 4 6) 0 0.1333 0.1332 6 7 ( 1114 1edq_A) ( 4690 1okg_A) 0.4668 0.4668 4.4405 ( 1 5 6) 0 0.8331 0.8331 6 6 ( 1114 1edq_A) ( 5022 1pin_A) nil ( 1114 1edq_A) ( 5222 1q6h_A) 0.6666 0.3333 3.8018 ( 0 4 6) 0 0.8331 0.4167 6 12 ( 1114 1edq_A) ( 6565 3eip_A) 0.8317 0.7135 5.7613 ( 0 7 10) 0 0.8317 0.7135 6 7 -------------------------------------------------------------------------------------------------------------------------