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Top-ranked similarities (based on backbone shifts), as measured by a combination of score and contiguity.
Some relevant parameters:  
        HELIX min length: 5     STRAND min length: 3
        shift-tolerance = -10    permissible-violations = 4   max-breaks = NIL   retain-m = 100   best-n = 100
        anglethresh = 0.5    septhresh = 5   min_length = 4   rmsd-tol = 9.9999999999999E12

Legend:
( ix1 chain1 )  ( ix2 chain2 )   rho___12 rho___21 L2_ERROR (Xbad Xsig Xtot) BRK   maxrho12 maxrho21  SS1 SS2

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( 1993 1gx3_A)  (  635 1cmx_A)     0.2632   0.3846   5.1316 (   0    6   10)   0     0.3675   0.5326   19  13
( 1993 1gx3_A)  (  672 1cs8_A)     0.2105   0.2000   7.5016 (   0    3    6)   0     0.2739   0.2693   19  20
( 1993 1gx3_A)  (  688 1cv8  )     0.2631   0.3571   7.4263 (   0    7   10)   0     0.5205   0.6891   19  14
( 1993 1gx3_A)  (  816 1deu_A)     0.2632   0.3333   5.0433 (   0    8   10)   0     0.3158   0.4000   19  15
( 1993 1gx3_A)  (  861 1dki_A)     0.2631   0.2941   7.3685 (   0    9   10)   0     0.3154   0.3523   19  17
( 1993 1gx3_A)  ( 1007 1e2t_A)     0.8874   0.9349   2.4346 (   5  105  136)   0     0.8874   0.9349   19  18
( 1993 1gx3_A)  ( 1272 1euv_A)     0.2105   0.2500   4.1188 (   0    1    6)   0     0.3126   0.3676   19  16
( 1993 1gx3_A)  ( 1993 1gx3_A)     1.0000   1.0000   0.0000 (   0  143  171)   0     1.0000   1.0000   19  19
( 1993 1gx3_A)  ( 2607 1iu4_A)     0.2559   0.2964  11.9745 (   2    9   10)   0     0.3860   0.4301   19  16
( 1993 1gx3_A)  ( 3306 1khq_A)     0.2631   0.4164   8.4633 (   0    8   10)   0     0.3499   0.4999   19  12
( 1993 1gx3_A)  ( 3912 1mdw_A)     0.2631   0.2499  10.9056 (   0    7   10)   0     0.3683   0.3499   19  20
( 1993 1gx3_A)  ( 3914 1me4_A)     0.3139   0.3940   5.0342 (   1    8   15)   0     0.3158   0.4000   19  15
( 1993 1gx3_A)  ( 4188 1nbf_A)     0.3139   0.2395   7.9424 (   1    8   15)   0     0.4084   0.3391   19  25
( 1993 1gx3_A)  ( 4300 1nln_A)     0.2632   0.3846   5.8505 (   0    5   10)   0     0.2886   0.3846   19  13
( 1993 1gx3_A)  ( 5392 1qmy_A)     0.2607   0.3695  11.4170 (   1    6   10)   0     0.4007   0.5076   19  13
( 1993 1gx3_A)  ( 5910 1the_A)     0.2105   0.3077   6.0699 (   0    4    6)   0     0.3158   0.4614   19  13
( 1993 1gx3_A)  ( 5970 1uch  )     0.2105   0.3077   7.9208 (   0    5    6)   0     0.2521   0.3295   19  13
( 1993 1gx3_A)  ( 6041 1ukf_A)     0.2632   0.3846   5.7065 (   0    2   10)   0     0.3157   0.4609   19  13
( 1993 1gx3_A)  ( 6286 1vjj_A)     0.4208   0.3477   6.4865 (   1   22   28)   0     0.4733   0.3912   19  23
( 1993 1gx3_A)  ( 6414 2cb5_A)     0.2105   0.1481   6.3757 (   0    4    6)   0     0.3802   0.2878   19  27
( 1993 1gx3_A)  ( 6571 3gcb  )     0.2584   0.2022   9.6669 (   3    9   15)   0     0.3500   0.2471   19  28

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