------------------------------------------------------------------------------------------------------------------------- Top-ranked similarities (based on backbone shifts), as measured by a combination of score and contiguity. Some relevant parameters: HELIX min length: 5 STRAND min length: 3 shift-tolerance = -10 permissible-violations = 4 max-breaks = NIL retain-m = 100 best-n = 100 anglethresh = 0.5 septhresh = 5 min_length = 4 rmsd-tol = 9.9999999999999E12 Legend: ( ix1 chain1 ) ( ix2 chain2 ) rho___12 rho___21 L2_ERROR (Xbad Xsig Xtot) BRK maxrho12 maxrho21 SS1 SS2 ------------------------------------------------------------------------------------------------------------------------- ( 60 1a73_A) ( 60 1a73_A) 1.0000 1.0000 0.0000 ( 0 41 45) 0 1.0000 1.0000 10 10 ( 60 1a73_A) ( 1609 1fr2_B) 0.3363 0.3670 7.8888 ( 1 4 6) 0 0.3363 0.3670 10 8 ( 60 1a73_A) ( 1775 1g8t_A) 0.4886 0.3549 6.2218 ( 1 9 10) 0 0.4886 0.3549 10 14 ( 60 1a73_A) ( 4791 1ouo_A) 0.3669 0.2325 9.8804 ( 1 5 6) 0 0.4520 0.2899 10 17 -------------------------------------------------------------------------------------------------------------------------