------------------------------------------------------------------------------------------------------------------------- Top-ranked similarities (based on backbone shifts), as measured by a combination of score and contiguity. Some relevant parameters: HELIX min length: 5 STRAND min length: 3 shift-tolerance = -10 permissible-violations = 4 max-breaks = NIL retain-m = 100 best-n = 100 anglethresh = 0.5 septhresh = 5 min_length = 4 rmsd-tol = 9.9999999999999E12 Legend: ( ix1 chain1 ) ( ix2 chain2 ) rho___12 rho___21 L2_ERROR (Xbad Xsig Xtot) BRK maxrho12 maxrho21 SS1 SS2 ------------------------------------------------------------------------------------------------------------------------- ( 4574 1oac_A) ( 1193 1ekg_A) 0.6249 0.6249 3.8001 ( 0 6 10) 0 0.6249 0.6249 8 8 ( 4574 1oac_A) ( 1281 1ew4_A) 0.6249 0.6249 3.8192 ( 0 6 10) 0 0.7477 0.7477 8 8 ( 4574 1oac_A) ( 4574 1oac_A) 1.0000 1.0000 0.0000 ( 0 22 28) 0 1.0000 1.0000 8 8 ( 4574 1oac_A) ( 5810 1sgo_A) 0.7497 0.8566 4.1250 ( 0 7 15) 0 0.7497 0.8566 8 7 -------------------------------------------------------------------------------------------------------------------------