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Top-ranked similarities (based on backbone shifts), as measured by a combination of score and contiguity.
Some relevant parameters:  
        HELIX min length: 5     STRAND min length: 3
        shift-tolerance = -10    permissible-violations = 4   max-breaks = NIL   retain-m = 100   best-n = 100
        anglethresh = 0.5    septhresh = 5   min_length = 4   rmsd-tol = 9.9999999999999E12

Legend:
( ix1 chain1 )  ( ix2 chain2 )   rho___12 rho___21 L2_ERROR (Xbad Xsig Xtot) BRK   maxrho12 maxrho21  SS1 SS2

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( 3861 1m6i_A)  (  768 1d7y_A)     0.7500   0.7500   1.6974 (   0    2   15)   0     0.7500   0.7500    8   8
( 3861 1m6i_A)  ( 1480 1fec_A)     0.6423   0.5286   4.2854 (   1    7   21)   0     0.8738   0.5832    8  12
( 3861 1m6i_A)  ( 1585 1fo4_A)     0.6249   0.8330   3.7438 (   0    3   10)   0     0.6249   0.8330    8   6
( 3861 1m6i_A)  ( 2114 1h6v_A)     0.8744   0.6362   4.1895 (   0    7   21)   0     0.8744   0.6362    8  11
( 3861 1m6i_A)  ( 3037 1jro_A)     0.6249   0.8330   3.8906 (   0    4   10)   0     0.6249   0.8330    8   6
( 3861 1m6i_A)  ( 3861 1m6i_A)     1.0000   1.0000   0.0000 (   0   18   28)   0     1.0000   1.0000    8   8
( 3861 1m6i_A)  ( 3991 1mo9_A)     0.8746   0.6363   3.7916 (   0    6   21)   0     0.8746   0.6363    8  11
( 3861 1m6i_A)  ( 4140 1n62_C)     0.6249   0.8330   3.6932 (   0    3   10)   0     0.6249   0.8330    8   6
( 3861 1m6i_A)  ( 4259 1nhp  )     0.8747   0.7776   3.5001 (   0    6   21)   0     0.8747   0.7776    8   9
( 3861 1m6i_A)  ( 4681 1ojt  )     0.8744   0.6998   4.1450 (   0    6   21)   0     0.8744   0.6998    8  10
( 3861 1m6i_A)  ( 5183 1q1r_A)     0.8749   0.8749   2.4472 (   0    5   21)   0     0.8749   0.8749    8   8
( 3861 1m6i_A)  ( 6574 3grs  )     0.5000   0.4000   4.0228 (   0    1    6)   0     0.6248   0.4999    8  10
( 3861 1m6i_A)  ( 6578 3lad_A)     0.5000   0.4000   4.1687 (   0    1    6)   0     0.6248   0.4999    8  10

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