Submitted Journal Papers
- J. Yin, Hypothesis testing for meiotic recombination rates from population SNP data.
Journals and Conference Proceedings
- E. P. Xing, R. Curtis, G. Schoenherr, S. Lee, J. Yin, K. Puniyani, W. Wu, P. Kinnaird.
GWAS in a Box: statistical and visual analytics of structured associations via GenAMap.
PLOS ONE, 2014.
[abstract] [pdf]
- J. Yin, Q. Ho and E. P. Xing.
A scalable approach to probabilistic latent space inference of large-scale networks.
Advances in Neural Information Processing Systems (NIPS), 2013.
[abstract] [pdf] [appendix] [code]
- Q. Ho, J. Yin and E. P. Xing.
On triangular versus edge representations - towards scalable modeling of networks.
Advances in Neural Information Processing Systems (NIPS), 2012.
[abstract] [pdf] [appendix] [code]
- J. Yin, X. Chen and E. P. Xing.
Group sparse additive models.
International Conference on
Machine Learning (ICML), 2012.
[abstract] [pdf] [code]
- R. Curtis, J. Yin, P. Kinnaird and E. P. Xing.
Finding genome-transcriptome-phenome association with structured association mapping and visualization in GenAMap.
Pacific Symposium on Biocomputing (PSB), 2012.
[abstract] [pdf] [code]
- J. Yin, M. I. Jordan, Y. S. Song.
Joint estimation of gene conversion rates and mean conversion tract lengths from population SNP data.
Bioinformatics, Vol. 25, Iss. 12, i231-i239, 2009.
[abstract] [pdf] [code]
- J. Yin, N. Beerenwinkel, J. Rahnenführer, and T. Lengauer.
Model selection for mixtures of mutagenetic trees.
Statistical Applications in Genetics and Molecular Biology, Vol. 5, Iss. 1, Article 17, 2006.
[abstract] [pdf] [code]
Workshop Papers and Conference Abstracts
- W. Dai, J. Wei, X. Zheng, J. K. Kim, S. Lee, J. Yin, Q. Ho and E. P. Xing.
Petuum: A system for iterative-convergent distributed ML.
Workshop on Big Learning at Advances in Neural Information Processing Systems (NIPS), 2013.
[abstract] [pdf] [code]
- J. Yin, M. Marchetti-Bowick, J. Howrylak, E. P. Xing.
A group sparse additive model for genome-wide association studies of dynamic complex traits.
The 63rd Annual Meeting of the American Society of Human Genetics (ASHG), 2013.
- J. Yin.
Hypothesis testing for estimating meiotic recombination rates from population SNP data.
The 17th Annual International Conference on Research in Computational Molecular Biology (RECOMB), 2013.
- J. Yin, R. Curtis and E. P. Xing.
Finding genome-transcriptome-phenome association with structured association mapping and visualization in GenAMap.
The 62nd Annual Meeting of the American Society of Human Genetics (ASHG), 2012.
- E. P. Xing, R. Curtis, S. Lee, S. Shringarpure and J. Yin.
GenAMap: A visual analytics software platform for eQTL and GWAS analysis.
The 62nd Annual Meeting of the American Society of Human Genetics (ASHG), 2012.
